--INITIALIZE
angelsmods = angelsmods or {}
angelsmods.bioprocessing = angelsmods.bioprocessing or {}
angelsmods.bioprocessing.number_tint = { r = 0.2, g = 1, b = 0.2, a = 1 }

--TRIGGER CHECKS
angelsmods.triggers = angelsmods.triggers or {}
--BIO TOKEN
angelsmods.triggers.lab_ignore_token = angelsmods.triggers.lab_ignore_token or {}
angelsmods.triggers.lab_ignore_token["lab-alien"] = true
angelsmods.triggers.lab_ignore_token["lab-module"] = true
--ARTIFACTS
angelsmods.triggers.artifacts = angelsmods.triggers.artifacts or {}
if bobmods and bobmods.enemies and data.raw.item["small-alien-artifact-blue"] then
  angelsmods.triggers.artifacts["red"] = true
  angelsmods.triggers.artifacts["yellow"] = true
  angelsmods.triggers.artifacts["orange"] = true
  angelsmods.triggers.artifacts["blue"] = true
  angelsmods.triggers.artifacts["purple"] = true
  angelsmods.triggers.artifacts["green"] = true
  angelsmods.triggers.artifacts["base"] = true -- pink
  bobmods.enemies.small_alien_artifacts = true
end
--BIO PASTES
angelsmods.triggers.bio_pastes = angelsmods.triggers.bio_pastes or {}
angelsmods.triggers.bio_pastes["cellulose"] = true -- required for petri dish

if angelsmods.functions.is_special_vanilla() then
else
  if angelsmods.triggers.artifacts["red"] then
    angelsmods.triggers.bio_pastes["copper"] = true
  end
  if angelsmods.triggers.artifacts["yellow"] then
    angelsmods.triggers.bio_pastes["gold"] = true
  end
  if angelsmods.triggers.artifacts["orange"] then
    angelsmods.triggers.bio_pastes["tungsten"] = true
  end
  if angelsmods.triggers.artifacts["blue"] then
    angelsmods.triggers.bio_pastes["cobalt"] = true
  end
  if angelsmods.triggers.artifacts["purple"] then
    angelsmods.triggers.bio_pastes["titanium"] = true
  end
  if angelsmods.triggers.artifacts["green"] then
    angelsmods.triggers.bio_pastes["zinc"] = true
  end
  if angelsmods.triggers.artifacts["base"] then
    angelsmods.triggers.bio_pastes["iron"] = true
  end
  --angelsmods.triggers.bio_pastes["silver"] = true --unused
end
--BIO ALTERNATIVES FOR PETRO
angelsmods.triggers.bio_rubber = angelsmods.triggers.bio_rubber or angelsmods.trigger.rubber or false
angelsmods.triggers.bio_resin = angelsmods.triggers.bio_resin or angelsmods.trigger.resin or false
angelsmods.triggers.bio_plastic = angelsmods.triggers.bio_plastic
  or (angelsmods.trigger.plastic and (angelsmods.triggers.bio_resin or angelsmods.triggers.bio_rubber))
  or false

angelsmods.triggers.paper = not angelsmods.functions.is_special_vanilla()
if angelsmods.triggers.paper then
  angelsmods.trigger.water_red_waste = true
end
angelsmods.triggers.crystals_full = (not angelsmods.functions.is_special_vanilla())
  or (mods["bobmodules"] and true or false)

-- set triggers for other angel mods
require("prototypes.bio-processing-triggers")

--LOAD FUNCTIONS
require("prototypes.bio-processing-functions")

--LOAD PROTOTYPES
require("prototypes.bio-processing-category")

require("prototypes.buildings.algae-farm")
require("prototypes.buildings.crop-farm")
require("prototypes.buildings.composter")
require("prototypes.buildings.seed-extractor")
require("prototypes.buildings.bio-press")
require("prototypes.buildings.bio-processor")
require("prototypes.buildings.nutrient-extractor")
require("prototypes.buildings.arboretum")
require("prototypes.buildings.refugium")
require("prototypes.buildings.hatchery")
require("prototypes.buildings.butchery")
require("prototypes.buildings.gardens")
require("prototypes.buildings.trees")
require("prototypes.buildings.bio-tile")
--require("prototypes.buildings.puffer-spawner")
require("prototypes.buildings.puffer-nest")
require("prototypes.buildings.alien-fish")

require("prototypes.items.bio-processing-algae")
require("prototypes.items.bio-processing-wood-paper")
require("prototypes.items.bio-processing-alien")
require("prototypes.items.bio-processing-alien-crystal")
require("prototypes.items.bio-processing-paste")
require("prototypes.items.crop-farming-vegetables")
require("prototypes.items.crop-farming-processing")
require("prototypes.items.bio-refugium")
require("prototypes.items.bio-refugium-fish")
require("prototypes.items.bio-refugium-puffer")
require("prototypes.items.bio-refugium-biter")
require("prototypes.items.bio-refugium-hogger")
require("prototypes.items.bio-module")

require("prototypes.recipes.bio-processing-algae")
require("prototypes.recipes.bio-processing-wood")
require("prototypes.recipes.bio-processing-paper")
require("prototypes.recipes.bio-processing-alien")
require("prototypes.recipes.bio-processing-alien-crystal")
require("prototypes.recipes.bio-processing-entity")
require("prototypes.recipes.bio-processing-paste")
require("prototypes.recipes.crop-farming-gardens")
require("prototypes.recipes.crop-farming-vegetables")
require("prototypes.recipes.crop-farming-processing-vegetables")
require("prototypes.recipes.crop-farming-processing-nutrients")
require("prototypes.recipes.crop-farming-processing-vegetable-oil")
require("prototypes.recipes.crop-farming-processing-fermentation")
require("prototypes.recipes.bio-refugium-fish")
require("prototypes.recipes.bio-refugium-puffer")
require("prototypes.recipes.bio-refugium-biter")
require("prototypes.recipes.bio-refugium-hogger")
require("prototypes.recipes.bio-module")

require("prototypes.technology.bio-processing-algae")
require("prototypes.technology.bio-processing-wood-paper")
require("prototypes.technology.bio-processing-alien")
require("prototypes.technology.crop-farming")
require("prototypes.technology.bio-refugium")
require("prototypes.technology.bio-module")